Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBO08311.1 | SBO08312.1 | VME0621_00403 | VME0621_00404 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SBO08311.1 | mntH_1 | VME0621_00403 | VME0621_00405 | Hypothetical protein. | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | 0.456 |
SBO08312.1 | SBO08311.1 | VME0621_00404 | VME0621_00403 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SBO08312.1 | mntH_1 | VME0621_00404 | VME0621_00405 | Hypothetical protein. | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | 0.456 |
SBO08314.1 | mntH_1 | VME0621_00406 | VME0621_00405 | Hypothetical protein. | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | 0.465 |
copA_1 | mntH_1 | VME0621_02456 | VME0621_00405 | Copper-exporting P-type ATPase A. | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | 0.417 |
mntH_1 | SBO08311.1 | VME0621_00405 | VME0621_00403 | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | Hypothetical protein. | 0.456 |
mntH_1 | SBO08312.1 | VME0621_00405 | VME0621_00404 | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | Hypothetical protein. | 0.456 |
mntH_1 | SBO08314.1 | VME0621_00405 | VME0621_00406 | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | Hypothetical protein. | 0.465 |
mntH_1 | copA_1 | VME0621_00405 | VME0621_02456 | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | Copper-exporting P-type ATPase A. | 0.417 |
mntH_1 | znuB_1 | VME0621_00405 | VME0621_00795 | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | High-affinity zinc uptake system membrane protein ZnuB. | 0.656 |
mntH_1 | znuB_2 | VME0621_00405 | VME0621_02475 | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | High-affinity zinc uptake system membrane protein ZnuB. | 0.656 |
znuB_1 | mntH_1 | VME0621_00795 | VME0621_00405 | High-affinity zinc uptake system membrane protein ZnuB. | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | 0.656 |
znuB_1 | znuB_2 | VME0621_00795 | VME0621_02475 | High-affinity zinc uptake system membrane protein ZnuB. | High-affinity zinc uptake system membrane protein ZnuB. | 0.906 |
znuB_2 | mntH_1 | VME0621_02475 | VME0621_00405 | High-affinity zinc uptake system membrane protein ZnuB. | Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | 0.656 |
znuB_2 | znuB_1 | VME0621_02475 | VME0621_00795 | High-affinity zinc uptake system membrane protein ZnuB. | High-affinity zinc uptake system membrane protein ZnuB. | 0.906 |