Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBO09056.1 | SBO09057.1 | VME0621_01149 | VME0621_01150 | acyl-CoA thioesterase II. | Putative transcriptional regulator. | 0.491 |
SBO09056.1 | yjmD | VME0621_01149 | VME0621_01151 | acyl-CoA thioesterase II. | Putative zinc-type alcohol dehydrogenase-like protein YjmD. | 0.498 |
SBO09057.1 | SBO09056.1 | VME0621_01150 | VME0621_01149 | Putative transcriptional regulator. | acyl-CoA thioesterase II. | 0.491 |
SBO09057.1 | SBO10618.1 | VME0621_01150 | VME0621_02740 | Putative transcriptional regulator. | Hypothetical protein. | 0.417 |
SBO09057.1 | SBO11522.1 | VME0621_01150 | VME0621_03658 | Putative transcriptional regulator. | Hypothetical protein. | 0.441 |
SBO09057.1 | fosB_1 | VME0621_01150 | VME0621_01824 | Putative transcriptional regulator. | Metallothiol transferase FosB. | 0.437 |
SBO09057.1 | yjmD | VME0621_01150 | VME0621_01151 | Putative transcriptional regulator. | Putative zinc-type alcohol dehydrogenase-like protein YjmD. | 0.830 |
SBO10618.1 | SBO09057.1 | VME0621_02740 | VME0621_01150 | Hypothetical protein. | Putative transcriptional regulator. | 0.417 |
SBO11522.1 | SBO09057.1 | VME0621_03658 | VME0621_01150 | Hypothetical protein. | Putative transcriptional regulator. | 0.441 |
fosB_1 | SBO09057.1 | VME0621_01824 | VME0621_01150 | Metallothiol transferase FosB. | Putative transcriptional regulator. | 0.437 |
yjmD | SBO09056.1 | VME0621_01151 | VME0621_01149 | Putative zinc-type alcohol dehydrogenase-like protein YjmD. | acyl-CoA thioesterase II. | 0.498 |
yjmD | SBO09057.1 | VME0621_01151 | VME0621_01150 | Putative zinc-type alcohol dehydrogenase-like protein YjmD. | Putative transcriptional regulator. | 0.830 |