STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfbTSugar phosphatase YfbT. (220 aa)    
Predicted Functional Partners:
yniC
2-deoxyglucose-6-phosphate phosphatase.
  
  
 
0.927
mtlA_1
PTS system mannitol-specific EIICBA component.
  
 
  0.910
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
    
 0.904
mtlA_2
PTS system mannitol-specific EIICBA component.
   
 
  0.901
cmtB
Mannitol-specific cryptic phosphotransferase enzyme IIA component.
     
  0.900
SBO09187.1
Hypothetical protein; Belongs to the UPF0303 family.
 
     0.813
yqaB
Fructose-1-phosphate phosphatase YqaB.
  
     0.728
hcaT
Putative 3-phenylpropionic acid transporter.
  
    0.645
yieH_2
6-phosphogluconate phosphatase.
  
   
 0.636
afr_2
1,5-anhydro-D-fructose reductase.
  
     0.480
Your Current Organism:
Vibrio mediterranei
NCBI taxonomy Id: 689
Other names: ATCC 43341, ATCC BAA-91 [[Vibrio shilonii]], ATCC:BAA:91 [[Vibrio shilonii]], CAIM 316, CCUG 19040, CECT 621, CIP 103203, CIP 107136 [[Vibrio shilonii]], DSM 13774 [[Vibrio shilonii]], DSM 19502, IFO 15635, LMG 11258, LMG 19703 [[Vibrio shilonii]], LMG:11258, LMG:19703 [[Vibrio shilonii]], NBRC 15635, NCTC 11946, V. mediterranei, Vibrio mediterraneus, Vibrio shiloi, Vibrio shiloi (sic) Kushmaro et al. 2001, Vibrio shilonii, Vibrio shilonii corrig. Kushmaro et al. 2001, strain 50, strain AK1 [[Vibrio shilonii]]
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.