Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
ybhF_1Putative ABC transporter ATP-binding protein YbhF. (308 aa)    
Predicted Functional Partners:
ybhS
Inner membrane transport permease YbhS.
  
 0.997
aaeA_2
P-hydroxybenzoic acid efflux pump subunit AaeA.
 
  
 0.971
SBO08387.1
ABC-2 family transporter protein.
  
 
 0.870
SBO11540.1
ABC-2 family transporter protein.
 
  
 0.838
SBO11539.1
ABC-2 family transporter protein.
 
  
 0.753
yadH
Inner membrane transport permease YadH.
  
  
 0.654
mdtN
Multidrug resistance protein MdtN.
 
  
 0.644
yccM_1
Putative electron transport protein YccM.
  
  
 0.640
atpC_1
ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.620
atpC_2
ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.620
Your Current Organism:
Vibrio mediterranei
NCBI taxonomy Id: 689
Other names: ATCC 43341, ATCC BAA-91 [[Vibrio shilonii]], ATCC:BAA:91 [[Vibrio shilonii]], CAIM 316, CCUG 19040, CECT 621, CIP 103203, CIP 107136 [[Vibrio shilonii]], DSM 13774 [[Vibrio shilonii]], DSM 19502, IFO 15635, LMG 11258, LMG 19703 [[Vibrio shilonii]], LMG:11258, LMG:19703 [[Vibrio shilonii]], NBRC 15635, NCTC 11946, V. mediterranei, Vibrio mediterraneus, Vibrio shiloi, Vibrio shiloi (sic) Kushmaro et al. 2001, Vibrio shilonii, Vibrio shilonii corrig. Kushmaro et al. 2001, strain 50, strain AK1 [[Vibrio shilonii]]
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