Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBO11935.1 | mepM_5 | VME0621_04071 | VME0621_04072 | Putative ABC transporter ATP-binding protein. | Murein DD-endopeptidase MepM. | 0.546 |
| SBO11935.1 | slt | VME0621_04071 | VME0621_04070 | Putative ABC transporter ATP-binding protein. | Soluble lytic murein transglycosylase precursor. | 0.478 |
| SBO11935.1 | trpR | VME0621_04071 | VME0621_04069 | Putative ABC transporter ATP-binding protein. | Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription. | 0.404 |
| amiB | mepM_5 | VME0621_05209 | VME0621_04072 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Murein DD-endopeptidase MepM. | 0.559 |
| amiB | slt | VME0621_05209 | VME0621_04070 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Soluble lytic murein transglycosylase precursor. | 0.436 |
| fliD_1 | fliD_3 | VME0621_01795 | VME0621_04923 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.918 |
| fliD_1 | fliI_1 | VME0621_01795 | VME0621_01786 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellum-specific ATP synthase. | 0.887 |
| fliD_1 | fliI_2 | VME0621_01795 | VME0621_04939 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellum-specific ATP synthase. | 0.874 |
| fliD_1 | mltC_2 | VME0621_01795 | VME0621_03949 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Membrane-bound lytic murein transglycosylase C precursor. | 0.450 |
| fliD_1 | slt | VME0621_01795 | VME0621_04070 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Soluble lytic murein transglycosylase precursor. | 0.517 |
| fliD_2 | fliI_1 | VME0621_02968 | VME0621_01786 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellum-specific ATP synthase. | 0.886 |
| fliD_2 | fliI_2 | VME0621_02968 | VME0621_04939 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellum-specific ATP synthase. | 0.893 |
| fliD_2 | mltC_2 | VME0621_02968 | VME0621_03949 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Membrane-bound lytic murein transglycosylase C precursor. | 0.450 |
| fliD_2 | slt | VME0621_02968 | VME0621_04070 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Soluble lytic murein transglycosylase precursor. | 0.450 |
| fliD_3 | fliD_1 | VME0621_04923 | VME0621_01795 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.918 |
| fliD_3 | fliI_1 | VME0621_04923 | VME0621_01786 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellum-specific ATP synthase. | 0.894 |
| fliD_3 | fliI_2 | VME0621_04923 | VME0621_04939 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellum-specific ATP synthase. | 0.899 |
| fliD_3 | mltC_2 | VME0621_04923 | VME0621_03949 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Membrane-bound lytic murein transglycosylase C precursor. | 0.450 |
| fliD_3 | slt | VME0621_04923 | VME0621_04070 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Soluble lytic murein transglycosylase precursor. | 0.450 |
| fliI_1 | fliD_1 | VME0621_01786 | VME0621_01795 | Flagellum-specific ATP synthase. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.887 |
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