Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0005 | GLE_0007 | GLE_0005 | GLE_0007 | N-6 DNA Methylase. | Type III restriction enzyme, res subunit/type I restriction enzyme R protein N terminus. | 0.990 |
GLE_0005 | GLE_0008 | GLE_0005 | GLE_0008 | N-6 DNA Methylase. | Hypothetical protein. | 0.990 |
GLE_0005 | hsdR | GLE_0005 | GLE_5545 | N-6 DNA Methylase. | Type I restriction modification system, subunit R. | 0.959 |
GLE_0005 | hsdS-2 | GLE_0005 | GLE_0006 | N-6 DNA Methylase. | Hypothetical protein. | 0.998 |
GLE_0007 | GLE_0005 | GLE_0007 | GLE_0005 | Type III restriction enzyme, res subunit/type I restriction enzyme R protein N terminus. | N-6 DNA Methylase. | 0.990 |
GLE_0007 | GLE_0008 | GLE_0007 | GLE_0008 | Type III restriction enzyme, res subunit/type I restriction enzyme R protein N terminus. | Hypothetical protein. | 0.994 |
GLE_0007 | hsdM | GLE_0007 | GLE_5543 | Type III restriction enzyme, res subunit/type I restriction enzyme R protein N terminus. | Type I restriction-modification system, M subunit. | 0.959 |
GLE_0007 | hsdS-2 | GLE_0007 | GLE_0006 | Type III restriction enzyme, res subunit/type I restriction enzyme R protein N terminus. | Hypothetical protein. | 0.980 |
GLE_0008 | GLE_0005 | GLE_0008 | GLE_0005 | Hypothetical protein. | N-6 DNA Methylase. | 0.990 |
GLE_0008 | GLE_0007 | GLE_0008 | GLE_0007 | Hypothetical protein. | Type III restriction enzyme, res subunit/type I restriction enzyme R protein N terminus. | 0.994 |
GLE_0008 | hsdM | GLE_0008 | GLE_5543 | Hypothetical protein. | Type I restriction-modification system, M subunit. | 0.959 |
GLE_0008 | hsdS-2 | GLE_0008 | GLE_0006 | Hypothetical protein. | Hypothetical protein. | 0.979 |
atpF | hsdS-2 | GLE_0685 | GLE_0006 | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | Hypothetical protein. | 0.521 |
atpF | polA-2 | GLE_0685 | GLE_4940 | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.412 |
hsdM | GLE_0007 | GLE_5543 | GLE_0007 | Type I restriction-modification system, M subunit. | Type III restriction enzyme, res subunit/type I restriction enzyme R protein N terminus. | 0.959 |
hsdM | GLE_0008 | GLE_5543 | GLE_0008 | Type I restriction-modification system, M subunit. | Hypothetical protein. | 0.959 |
hsdM | hsdR | GLE_5543 | GLE_5545 | Type I restriction-modification system, M subunit. | Type I restriction modification system, subunit R. | 0.990 |
hsdM | hsdS-2 | GLE_5543 | GLE_0006 | Type I restriction-modification system, M subunit. | Hypothetical protein. | 0.992 |
hsdR | GLE_0005 | GLE_5545 | GLE_0005 | Type I restriction modification system, subunit R. | N-6 DNA Methylase. | 0.959 |
hsdR | hsdM | GLE_5545 | GLE_5543 | Type I restriction modification system, subunit R. | Type I restriction-modification system, M subunit. | 0.990 |
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