STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comFPutative comF family protein. (350 aa)    
Predicted Functional Partners:
dprA
DNA protecting protein DprA.
 
 
 0.932
GLE_3036
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.909
GLE_0236
Mg chelatase family protein.
 
  
 0.866
radC
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.820
xerD
Tyrosine recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.752
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.723
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.719
GLE_4144
Hypothetical protein; Belongs to the UPF0102 family.
 
    0.686
GLE_3877
ABC transporter, ATP-binding protein.
   
    0.674
GLE_0164
Sensory box histidine kinase.
  
  
 0.616
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.