Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GLE_0067Diguanylate cyclase. (566 aa)    
Predicted Functional Partners:
GLE_1812
Sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase.
 
 
 0.934
GLE_3505
Cyclic diguanylate phosphodiesterase/diguanylate cyclase.
 
 0.817
GLE_0226
Diguanylate cyclase (GGDEF) domain.
  
 
   0.781
GLE_3458
Cyclic diguanylate phosphodiesterase/diguanylate cyclase.
  
     0.774
GLE_5164
Response regulator protein.
  
    0.772
GLE_2281
Response regulator.
  
  
 0.738
GLE_0632
Sensory box histidine kinase.
 
 0.726
GLE_0894
Sensory box protein.
 
0.722
morA
PAS domain protein.
 
0.686
GLE_1739
Sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase.
 
0.591
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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