Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GLE_0070Glutamate synthase, small subunit. (510 aa)    
Predicted Functional Partners:
gltB
Glutamine amidotransferases class-II/glutamate synthase.
 0.999
GLE_3003
Glutamate synthase; Belongs to the glutamate synthase family.
 
 0.996
nuoF
NADH oxidoreductase F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
 
 0.987
GLE_5200
Indolepyruvate ferredoxin oxidoreductase.
   
 0.964
glnA
Glutamine synthetase, type I.
  
 
 0.926
GLE_2691
Bacterial NAD-glutamate dehydrogenase family protein.
     
 0.894
GLE_4392
Oxidoreductase.
 
 
 0.893
GLE_3067
Oxidoreductase.
 
 
 0.889
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.884
GLE_3747
Aminotransferase class I and II.
   
 
 0.884
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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