Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0077Hypothetical protein. (145 aa)    
Predicted Functional Partners:
GLE_0078
Guanyl-specific ribonuclease Sa3 (RNase Sa3).
 
   0.993
GLE_0522
Hypothetical protein.
  
     0.683
GLE_1272
Hypothetical protein.
  
     0.618
GLE_3061
Surface antigen family protein.
  
     0.587
GLE_0079
Hypothetical protein.
       0.554
GLE_2684
Hypothetical protein.
  
     0.482
GLE_4974
Hypothetical protein.
  
     0.470
GLE_4573
Rhodanese domain protein; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
  
     0.468
GLE_0863
ATP-dependent protease La (LON) domain.
  
     0.409
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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