Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GLE_0095Acetyltransferase (GNAT) family. (171 aa)    
Predicted Functional Partners:
GLE_0995
Acetyltransferase (GNAT) family.
 
     0.750
GLE_0087
Acetyltransferase, including N-acetylases of ribosomal protein.
 
     0.632
gltB
Glutamine amidotransferases class-II/glutamate synthase.
   
 
 0.600
pheA
Chorismate mutase/prephenate dehydratase/ACT domain.
    
  0.548
GLE_0096
Endoribonuclease L-PSP family protein.
       0.539
GLE_0097
Hypothetical protein.
       0.539
GLE_0258
Acetyltransferase (GNAT) family.
  
 
  0.498
tkB
Transketolase.
     
  0.497
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
     
  0.447
phhA
Phenylalanine-4-hydroxylase.
     
  0.447
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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