STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0109Membrane protein. (436 aa)    
Predicted Functional Partners:
GLE_0591
Membrane protein.
  
     0.758
GLE_3583
Sulfotransferase.
  
     0.699
GLE_2871
CalU5.
  
     0.561
GLE_2869
CalU4.
  
     0.558
GLE_2867
CalU2.
  
     0.543
GLE_0734
Hypothetical protein.
  
     0.527
GLE_0108
Hypothetical protein.
       0.516
GLE_2868
CalU3.
  
     0.505
GLE_0881
ATP-dependent protease.
  
     0.452
GLE_4575
Hypothetical protein.
  
     0.438
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.