STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0117Hydrolase, alpha/beta fold family. (288 aa)    
Predicted Functional Partners:
GLE_2508
Hydrolase, alpha/beta fold family.
  
     0.609
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.558
GLE_0232
Hydrolase, alpha/beta hydrolase fold family protein.
  
  
  0.505
GLE_0412
Hydrolase, alpha/beta hydrolase fold family protein.
  
  
  0.480
dmpD
2-hydroxymuconic semialdehyde hydrolase.
  
  
  0.477
GLE_0118
Hypothetical protein.
       0.472
GLE_1847
Hydrolase, alpha/beta fold family protein.
  
  
  0.470
GLE_0795
Nitroreductase family protein.
  
 
 0.462
GLE_4894
Amino acid adenylation domain protein.
   
 0.462
GLE_0121
Hypothetical protein.
       0.458
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.