STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0144Fatty acid desaturase. (398 aa)    
Predicted Functional Partners:
GLE_4391
Fatty acid desaturase.
    
 0.923
GLE_4392
Oxidoreductase.
     
 0.914
GLE_3067
Oxidoreductase.
     
 0.601
GLE_0798
Hypothetical protein.
  
     0.598
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
  
     0.591
GLE_1885
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.521
GLE_1504
Hypothetical protein.
  
     0.499
GLE_2241
Regulatory protein.
  
     0.490
GLE_2995
NAD dependent epimerase/dehydratase family.
   
 0.465
GLE_3571
ABC transporter, ATP-binding protein/transmembrane region.
  
     0.453
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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