STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0149ABC transporter, ATP-binding protein. (257 aa)    
Predicted Functional Partners:
GLE_3608
ABC-2 type transporter.
 
 
  0.923
GLE_3471
ABC transporter, ATP-binding protein.
 
    
0.914
GLE_5233
Toluene ABC transporter.
  
 
0.902
GLE_2529
ABC transporter, ATP-binding protein.
 
    
0.839
GLE_0148
Hypothetical protein.
       0.800
GLE_0147
Hypothetical protein.
       0.773
GLE_5023
Membrane protein.
  
 0.752
GLE_3494
ATPase, AAA family protein; Belongs to the AAA ATPase family.
  
 
   0.744
GLE_2517
ABC transporter, ATP-binding protein.
  
 
  0.672
rpsK
Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
     0.646
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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