STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0155Hypothetical protein. (447 aa)    
Predicted Functional Partners:
vacJ
Lipoprotein VacJ precursor.
    
 
 0.905
GLE_0837
Transcriptional regulator.
  
 
 
 0.647
GLE_0164
Sensory box histidine kinase.
 
 
 0.604
GLE_3084
TonB-dependent receptor.
  
     0.603
GLE_3159
TonB-dependent receptor.
  
 
 
 0.588
GLE_4937
Dipeptidyl peptidase IV/S9A/B/C peptidase domain protein.
  
 
 0.582
GLE_0156
Hypothetical protein.
       0.565
GLE_0159
Transcriptional regulator, LuxR family.
 
    0.545
GLE_1426
TonB-dependent receptor.
  
 
 
 0.531
GLE_4810
Amidohydrolase family protein.
  
 
 
 0.513
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.