STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0163Hypothetical protein. (236 aa)    
Predicted Functional Partners:
GLE_2608
AP endonuclease, family 2.
     0.807
GLE_2603
Xylose isomerase; Belongs to the hyi family.
 
   
 0.772
GLE_2604
GMC oxidoreductase family protein.
 
     0.765
GLE_2610
Transporter, major facilitator family.
 
     0.745
GLE_4614
Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.720
GLE_2605
Tat (twin-arginine translocation) pathway signal sequence.
 
     0.691
GLE_2857
Lipolytic enzyme, G-D-S-L family.
  
     0.654
efp
Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.
  
 0.619
yeiP
Elongation factor P-like protein.
  
 0.619
GLE_4712
Hypothetical protein.
  
     0.577
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.