STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0165PKD repeat family protein. (412 aa)    
Predicted Functional Partners:
phoA
Alkaline phosphatase precursor.
  
     0.704
GLE_3839
Zinc carboxypeptidase/PKD domain/proprotein convertase P-domain protein.
 
     0.636
GLE_3479
Peptidase, families S8 and S53.
  
  
  0.582
GLE_0833
Beta-lytic metalloendopeptidase; Belongs to the peptidase M23A family.
  
     0.559
GLE_3845
PKD domain/proprotein convertase P-domain protein.
 
  
  0.556
GLE_4066
Hypothetical protein.
  
     0.536
GLE_3854
Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family.
 
  
  0.493
GLE_5020
Pyridoxal-phosphate dependent enzyme.
  
     0.486
GLE_1753
Hypothetical protein.
  
     0.482
chiA2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.480
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.