STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfp4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (195 aa)    
Predicted Functional Partners:
GLE_4894
Amino acid adenylation domain protein.
 
 0.907
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.904
GLE_1885
Malonyl CoA-acyl carrier protein transacylase.
   
 0.841
GLE_2560
Amino acid adenylation domain protein.
 
 
 0.837
GLE_4967
Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.821
GLE_2557
Amino acid adenylation domain protein.
 
 
 0.748
GLE_2622
Isochorismatase.
  
 
 0.747
GLE_2559
Amino acid adenylation domain protein.
 
 
 0.713
gidB
Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
       0.697
lgrE
Linear gramicidin dehydrogenase LgrE.
 
  
 0.672
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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