STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0188Hypothetical protein. (249 aa)    
Predicted Functional Partners:
GLE_0185
Hypothetical protein.
 
 
  0.911
GLE_0187
Hypothetical protein.
 
 
   0.904
GLE_0184
Hypothetical protein.
 
    0.828
GLE_0186
Hypothetical protein.
       0.605
GLE_2740
Alpha-2-macroglobulin family N- region; Protects the bacterial cell from host peptidases.
  
    0.517
GLE_4250
Pyridoxal-phosphate dependent enzyme/CBS domain pair.
    
  0.494
GLE_3376
Cytidylyltransferase family; Belongs to the CDS family.
     
 0.467
GLE_0182
Hypothetical protein.
 
    0.458
GLE_2115
Alpha-2-macroglobulin family N- region.
   
    0.448
GLE_0183
PspA/IM30 family protein.
 
     0.439
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.