STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0220Collagenase/peptidase family M9 N-terminal. (886 aa)    
Predicted Functional Partners:
nprV-2
Neutral protease; Extracellular zinc metalloprotease.
  
  
 0.760
GLE_4653
Tat (twin-arginine translocation) pathway signal sequence domain protein.
  
     0.747
nprV
Neutral protease; Extracellular zinc metalloprotease.
  
     0.742
GLE_2032
Hypothetical protein.
  
     0.740
GLE_5249
Nipsnap family protein.
  
     0.735
GLE_2033
Hypothetical protein.
  
     0.727
GLE_4852
Chitin binding domain.
  
     0.683
GLE_2869
CalU4.
  
     0.651
GLE_5314
Fungalysin/thermolysin propeptide/thermolysin metallopeptidase domain protein; Extracellular zinc metalloprotease.
  
     0.644
GLE_5439
Fungalysin/thermolysin propeptide/thermolysin metallopeptidase domain protein; Extracellular zinc metalloprotease.
  
     0.644
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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