STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0227Tetratricopeptide repeat domain protein. (880 aa)    
Predicted Functional Partners:
GLE_0632
Sensory box histidine kinase.
 
 
 0.976
GLE_0226
Diguanylate cyclase (GGDEF) domain.
 
 0.974
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.931
GLE_0164
Sensory box histidine kinase.
 
 
 0.913
GLE_1143
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.885
GLE_1142
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.879
GLE_3438
Diguanylate cyclase.
  
 
 0.865
pilL
Hpt domain protein; Response regulator receiver domain/histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/CheW-like domain.
    
 0.861
GLE_0026
Hypothetical protein.
    
 0.827
GLE_3458
Cyclic diguanylate phosphodiesterase/diguanylate cyclase.
  
 
 0.805
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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