STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmpD2-hydroxymuconic semialdehyde hydrolase. (336 aa)    
Predicted Functional Partners:
GLE_1847
Hydrolase, alpha/beta fold family protein.
  
     0.752
dhlA
Haloalkane dehalogenase.
  
     0.746
GLE_2003
Hydrolase, alpha/beta fold family.
  
     0.738
GLE_2508
Hydrolase, alpha/beta fold family.
  
     0.672
GLE_0232
Hydrolase, alpha/beta hydrolase fold family protein.
 
    
0.577
GLE_2498
Hydrolase, alpha/beta fold family.
  
  
  0.576
GLE_4894
Amino acid adenylation domain protein.
   
 0.567
GLE_4518
PGAP1-like protein.
  
  
  0.555
GLE_0233
Hypothetical protein.
       0.500
mutA
methylmalonyl-CoA mutase, alpha subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
     
 0.471
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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