Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0237Hypothetical protein. (92 aa)    
Predicted Functional Partners:
GLE_0236
Mg chelatase family protein.
       0.839
recO
DNA repair protein; Involved in DNA repair and RecF pathway recombination.
 
     0.694
smg
Smg protein; Belongs to the Smg family.
  
     0.686
GLE_3041
Hypothetical protein.
  
     0.625
GLE_0895
YecA family protein; Belongs to the UPF0149 family.
  
    0.596
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
       0.567
GLE_0205
Hypothetical protein.
  
   
 0.536
gvcR
Glycine cleavage system transcriptional repressor.
  
     0.475
GLE_0292
Hypothetical protein.
  
     0.474
bioH
Putative pimeloyl-BioC--CoA transferase BioH; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.
  
     0.464
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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