Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0296Amidohydrolase family protein. (423 aa)    
Predicted Functional Partners:
GLE_3443
Amidohydrolase family protein.
  
  
  0.754
GLE_4096
Amidohydrolase family protein.
  
  
  0.723
GLE_0297
Amidohydrolase family protein.
 
  
 
0.700
GLE_1569
Amidohydrolase family protein.
  
  
  0.673
atzA
Atrazine chlorohydrolase.
  
  
  0.659
GLE_4381
Amidohydrolase family protein.
  
  
  0.643
GLE_1266
Hypothetical protein.
  
     0.597
GLE_0294
Cytochrome oxidase assembly protein.
       0.590
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.590
GLE_0086
BNR repeat.
  
  
  0.585
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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