Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0308 | dnaG | GLE_0308 | GLE_0306 | GatB/Yqey domain protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.421 |
GLE_0308 | rbn | GLE_0308 | GLE_0307 | GatB/Yqey domain protein. | Ribonuclease BN. | 0.470 |
GLE_0308 | rpmE | GLE_0308 | GLE_0925 | GatB/Yqey domain protein. | Ribosomal protein L31. | 0.448 |
GLE_0308 | rpsO | GLE_0308 | GLE_2179 | GatB/Yqey domain protein. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.575 |
GLE_0308 | rpsU | GLE_0308 | GLE_0309 | GatB/Yqey domain protein. | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.948 |
dnaG | GLE_0308 | GLE_0306 | GLE_0308 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | GatB/Yqey domain protein. | 0.421 |
dnaG | rbn | GLE_0306 | GLE_0307 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Ribonuclease BN. | 0.570 |
dnaG | rpsU | GLE_0306 | GLE_0309 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.456 |
rbn | GLE_0308 | GLE_0307 | GLE_0308 | Ribonuclease BN. | GatB/Yqey domain protein. | 0.470 |
rbn | dnaG | GLE_0307 | GLE_0306 | Ribonuclease BN. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.570 |
rpmE | GLE_0308 | GLE_0925 | GLE_0308 | Ribosomal protein L31. | GatB/Yqey domain protein. | 0.448 |
rpmE | rpsO | GLE_0925 | GLE_2179 | Ribosomal protein L31. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |
rpmE | rpsU | GLE_0925 | GLE_0309 | Ribosomal protein L31. | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.994 |
rpsO | GLE_0308 | GLE_2179 | GLE_0308 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | GatB/Yqey domain protein. | 0.575 |
rpsO | rpmE | GLE_2179 | GLE_0925 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | Ribosomal protein L31. | 0.998 |
rpsO | rpsU | GLE_2179 | GLE_0309 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.998 |
rpsU | GLE_0308 | GLE_0309 | GLE_0308 | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | GatB/Yqey domain protein. | 0.948 |
rpsU | dnaG | GLE_0309 | GLE_0306 | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.456 |
rpsU | rpmE | GLE_0309 | GLE_0925 | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Ribosomal protein L31. | 0.994 |
rpsU | rpsO | GLE_0309 | GLE_2179 | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |