STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0338Alpha,alpha-phosphotrehalase. (533 aa)    
Predicted Functional Partners:
scrK
Fructokinase-1.
 
  
 0.922
GLE_3654
Glycosyl hydrolase, family 31.
    
 0.921
GLE_2523
Beta-glucosidase.
   
 
 0.891
GLE_5129
Glycosyl hydrolase, family 3.
   
 
 0.891
pgmB
Beta-phosphoglucomutase.
 
 
 0.864
iam
Isoamylase precursor; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.820
amyA
Cyclomaltodextrin glucanotransferase.
     0.724
GLE_1913
Amino acid permease.
    
  0.720
GLE_1915
Amino acid permease.
    
  0.720
GLE_3100
Amino acid permease.
    
  0.720
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.