STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0351Fimbrial protein. (338 aa)    
Predicted Functional Partners:
pilA
Type IV pilus assembly protein; Belongs to the N-Me-Phe pilin family.
 
 
0.680
pilE-2
Type IV pilus assembly protein.
 
 
 0.546
GLE_0350
RDD family.
 
    
0.522
pilW-2
Type IV pilus assembly protein.
 
 
 0.508
pilQ
Type IV assembly protein.
 
   
 0.479
pilN
Type IV pilus assembly protein.
  
   
 0.451
xpsG
General secretion pathway protein G.
   
 0.444
gspG
General secretion pathway protein G.
   
 0.444
pilE
Type IV pilus assembly protein.
   
 0.428
GLE_4178
General secretion pathway protein I.
   
 0.428
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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