STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0354Peptidoglycan-binding LysM. (351 aa)    
Predicted Functional Partners:
pilQ
Type IV assembly protein.
 
 
 
 0.979
GLE_1049
UPF0339 protein YegP.
  
   0.944
pilN
Type IV pilus assembly protein.
  
 
   0.930
pilO
Type IV assembly protein.
  
 
   0.929
pilM
Type IV pilus assembly protein.
  
 
   0.928
pilP
Type IV assembly protein.
  
 
   0.883
pilZ-2
Type IV pilus assembly protein PilZ.
  
    0.769
pilE
Type IV pilus assembly protein.
  
     0.756
pilV-2
Type IV pilus assembly protein.
  
     0.755
pilW-2
Type IV pilus assembly protein.
  
     0.747
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.