STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0362CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. (356 aa)    
Predicted Functional Partners:
GLE_0361
Lipopolysaccharide core biosynthesis glycosyl transferase.
     0.951
GLE_0171
Lipid A Biosynthesis N-terminal domain.
  
     0.721
GLE_0359
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.565
GLE_0976
Hypothetical protein.
  
     0.557
GLE_0778
Extracellular ribonuclease precursor.
  
     0.546
GLE_4903
Sensor histidine kinase.
  
     0.537
GLE_4558
Outer membrane efflux protein.
  
     0.520
GLE_2255
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
   
 
 0.486
GLE_3877
ABC transporter, ATP-binding protein.
  
 
 0.484
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.458
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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