STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0377Transcriptional regulator, lacI family. (350 aa)    
Predicted Functional Partners:
scrK
Fructokinase-1.
 
 
 0.908
gluP
Glucose/galactose transporter.
 
     0.851
GLE_0374
N-acylglucosamine 2-epimerase family protein.
 
     0.846
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
 
 0.822
ptsH
Phosphocarrier protein HPr (Histidine-containing protein).
   
 
 0.716
GLE_4894
Amino acid adenylation domain protein.
    
 
 0.604
GLE_0378
Alpha-1,2-mannosidase, putative.
 
     0.509
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.456
GLE_2622
Isochorismatase.
    
   0.440
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.440
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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