STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0378Alpha-1,2-mannosidase, putative. (797 aa)    
Predicted Functional Partners:
gluP
Glucose/galactose transporter.
 
     0.802
GLE_5067
F5/8 type C domain protein.
 
   
 0.774
GLE_2271
Beta-hexosaminidase.
     0.746
GLE_5161
Beta-hexosaminidase.
     0.745
GLE_2273
Glycosyl hydrolase, family 2.
 
     0.667
GLE_0844
endo-beta-N-acetylglucosaminidase.
 
     0.664
GLE_3884
Protease 1.
 
      0.656
GLE_5068
alpha-L-fucosidase.
 
     0.616
GLE_5156
Glucose/galactose transporter.
 
     0.611
GLE_2533
Transporter, major facilitator family.
 
     0.529
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.