STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0433OmpA/MotB family protein. (282 aa)    
Predicted Functional Partners:
icmF
Type VI secretion protein IcmF.
  
  0.979
GLE_0432
Type VI secretion-associated protein, BMA_A0400 family.
 
    0.923
GLE_0523
OmpA/MotB family protein.
  
 
 0.802
ply
L-alanyl-D-glutamate peptidase.
 
     0.793
GLE_0443
Type IV / VI secretion system protein, DotU family.
 
  
  0.744
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.694
tssJ
Type VI secretion lipoprotein, VC_A0113 family.
  
     0.681
tssK
Type VI secretion protein, VC_A0114 family.
  
     0.664
GLE_0442
Type VI secretion system Vgr family protein.
  
     0.646
tssE
Type VI secretion system lysozyme-related protein.
  
     0.646
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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