STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcAArginine deiminase. (605 aa)    
Predicted Functional Partners:
GLE_0442
Type VI secretion system Vgr family protein.
       0.774
GLE_1755
Peptidase, S41 family.
  
     0.707
GLE_2048
Peptidase, S41 family.
  
     0.701
mutM-2
formamidopyrimidine-DNA glycosylase.
  
     0.664
GLE_1847
Hydrolase, alpha/beta fold family protein.
  
     0.640
GLE_2686
5'-nucleotidase.
  
     0.637
GLE_1517
Flavodoxin-like fold family protein.
  
     0.613
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.523
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
  
 
 
 0.503
GLE_0729
NADH pyrophosphatase-like rudimentary NUDIX domain protein; Belongs to the Nudix hydrolase family.
  
  
  0.502
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.