STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0483Fimbrial protein. (178 aa)    
Predicted Functional Partners:
GLE_5456
Outer membrane usher protein.
 
 0.895
GLE_5455
Gram-negative pili assembly chaperone, N-terminal domain.
 
 
 0.875
GLE_2028
Hypothetical protein.
  
     0.666
GLE_0102
Type I pili usher pathway.
 
 
 0.599
fasD
Outer membrane usher protein.
 
 0.573
GLE_0484
Peptidase, families S8 and S53/proprotein convertase P-domain protein.
  
    0.534
GLE_0320
PAAR motif family protein.
  
    0.533
GLE_0485
Hypothetical protein.
       0.528
GLE_3457
Peptidoglycan-binding LysM.
  
     0.492
GLE_2408
Flavin reductase like domain protein.
  
     0.486
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.