Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0494Ricin type lectin domain protein. (192 aa)    
Predicted Functional Partners:
GLE_2053
Endochitinase GH fam 19.
  
     0.761
GLE_4212
Serine/threonine protein kinase.
  
     0.756
GLE_4605
Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II.
  
     0.744
GLE_3278
Hydrolase.
  
  
  0.723
chiA1
Chitinase A.
 
     0.693
GLE_1989
Alpha-lytic protease prodomain/trypsin.
  
     0.684
GLE_1049
UPF0339 protein YegP.
    
   0.683
GLE_1992
Alpha-lytic protease prodomain/trypsin.
  
     0.682
GLE_3668
Alpha-lytic protease prodomain.
  
     0.681
sprC
streptogrisin-C precursor.
  
     0.671
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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