Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0513Glyoxalase family protein. (139 aa)    
Predicted Functional Partners:
GLE_0514
Transcriptional regulator, AraC family.
 
    0.907
GLE_4360
Hypothetical protein.
  
     0.531
GLE_4828
Transcriptional regulator, DoeR family.
 
     0.497
GLE_3707
Hypothetical protein.
  
 
  0.473
GLE_1769
Transcriptional regulator, AraC family.
  
    0.471
GLE_0670
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
  0.442
GLE_0512
Hypothetical protein.
       0.437
GLE_0515
Hypothetical protein.
       0.433
GLE_0854
Transcriptional regulator, AraC family.
  
    0.432
soxR
Redox-sensitive transcriptional activator SoxR.
  
     0.430
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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