STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0519Hypothetical protein. (288 aa)    
Predicted Functional Partners:
gluB
Glucanase B.
 
 
   0.856
GLE_4459
Hypothetical protein.
  
     0.580
GLE_5255
Hypothetical protein.
  
     0.524
phaC
poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
     
 0.519
GLE_0379
Hypothetical protein.
  
     0.499
phaZ
Polyhydroxyalkanoate depolymerase, intracellular.
     
 0.499
GLE_1906
Hypothetical protein.
  
     0.487
GLE_3013
NAD dependent epimerase/dehydratase family protein.
  
     0.458
GLE_2861
Lipoprotein.
     
 0.457
GLE_4605
Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II.
  
     0.456
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.