STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0523OmpA/MotB family protein. (219 aa)    
Predicted Functional Partners:
GLE_0522
Hypothetical protein.
     0.990
GLE_2449
Histidine kinase.
 
  
 0.964
GLE_0524
Hypothetical protein.
      0.949
GLE_0521
Hypothetical protein.
      0.942
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.870
GLE_4219
Mce related protein.
   
   0.853
GLE_4649
RNA polymerase sigma factor, sigma-70 family.
  
  
 0.848
flgB
Flagellar basal-body rod protein.
  
  
 0.835
pilL
Hpt domain protein; Response regulator receiver domain/histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/CheW-like domain.
  
 
 0.830
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.821
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.