STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0523OmpA/MotB family protein. (219 aa)    
Predicted Functional Partners:
GLE_0522
Hypothetical protein.
     0.991
GLE_0521
Hypothetical protein.
      0.939
GLE_0524
Hypothetical protein.
      0.936
GLE_2449
Histidine kinase.
 
  
 0.934
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.873
pilL
Hpt domain protein; Response regulator receiver domain/histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/CheW-like domain.
  
  
 0.865
GLE_4649
RNA polymerase sigma factor, sigma-70 family.
  
  
 0.863
flgB
Flagellar basal-body rod protein.
  
  
 0.848
flgD
Flagellar hook capping protein.
  
  
 0.841
fliE
Flagellar hook-basal body complex protein.
  
  
 0.839
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.