Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GLE_05293-demethylubiquinone-9 3-methyltransferase. (248 aa)    
Predicted Functional Partners:
GLE_0527
Oxidoreductase.
 
 
   0.685
GLE_0528
Oxidoreductase.
       0.594
GLE_0530
Hypothetical protein.
       0.572
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.559
GLE_1919
Ubiquinone biosynthesis protein COQ7.
   
 0.545
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.545
GLE_4707
N-acetylmuramoyl-L-alanine amidase.
  
     0.540
GLE_4072
Transporter, monovalent cation:proton antiporter-2 (CPA2) family.
  
     0.486
ubiF
2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1, 4-benzoquinol.
    
 0.447
ubiH
2-polyprenyl-6-methoxyphenol 4-hydroxylase.
    
 0.447
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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