STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0536Membrane associated hydrolase. (740 aa)    
Predicted Functional Partners:
GLE_1885
Malonyl CoA-acyl carrier protein transacylase.
   
 0.819
GLE_0542
Nucleotidyl transferase family.
 
     0.808
GLE_0537
Membrane protein.
       0.773
prk
Phosphoribulokinase.
 
     0.715
GLE_2622
Isochorismatase.
 
 
 0.709
GLE_4894
Amino acid adenylation domain protein.
  
 0.691
GLE_0541
Glycosyl transferase, group 2 family protein.
 
     0.624
GLE_0538
Haloacid dehalogenase-like hydrolase.
 
     0.605
GLE_3113
Zinc carboxypeptidase.
  
     0.577
GLE_4937
Dipeptidyl peptidase IV/S9A/B/C peptidase domain protein.
  
     0.559
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.