STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0547Transporter, major facilitator family. (455 aa)    
Predicted Functional Partners:
GLE_0546
Linear gramicidin synthetase subunit D.
  
  0.971
lgrB
Linear gramicidin synthetase subunit B.
   
  0.942
GLE_0544
Linear gramicidin synthetase subunit C.
   
  0.939
GLE_2958
Linear gramicidin synthetase subunit C.
 
   
  0.691
GLE_4894
Amino acid adenylation domain protein.
 
 
 
 0.665
GLE_1848
Condensation/amino acid adenylation/thioesterase domain protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
  0.639
GLE_2959
Linear gramicidin synthetase subunit D.
 
   
  0.608
GLE_2957
Hypothetical protein.
 
  
  0.563
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
     0.523
kmo
Kynurenine 3-monooxygenase.
 
     0.481
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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