STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0561long-chain-fatty-acid--CoA ligase. (556 aa)    
Predicted Functional Partners:
GLE_4894
Amino acid adenylation domain protein.
  
0.952
aas
2-acylglycerophosphoethanolamine acyltransferase.
 
  0.943
GLE_1691
Malonyl CoA-acyl carrier protein transacylase.
 
   
  0.774
GLE_0562
Putative acetyltransferase.
       0.686
GLE_2560
Amino acid adenylation domain protein.
  
0.632
GLE_2282
Sensory/regulatory protein RpfC.
     
 0.630
GLE_2621
Condensation domain protein.
 
 
  0.610
fadJ
Fatty acid oxidation complex subunit alpha.
 
 0.563
GLE_0563
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.562
fadB
3-hydroxyacyl-CoA dehydrogenase.
 
 0.561
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (24%) [HD]