Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mmsB3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (299 aa)    
Predicted Functional Partners:
paaG
enoyl-CoA hydratase.
 
 0.998
crt
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.935
mmsA
Methylmalonate-semialdehyde dehydrogenase (acylating).
 
 0.932
GLE_0576
acyl-coA dehydrogenase.
 
 
 0.906
queH
Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
       0.773
GLE_0246
Oxidoreductase.
  
  
 
0.692
GLE_1967
methylcrotonoyl-CoA carboxylase.
 
 
  0.652
GLE_1950
methylcrotonoyl-CoA carboxylase subunit alpha.
  
 
 0.616
GLE_0581
Putative nucleotidyltransferase, GrpB family.
 
     0.598
GLE_2729
Quinone oxidoreductase, YhdH/YhfP family.
     
  0.591
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.