Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GLE_0588Glycosyl transferase, group 1 family protein. (404 aa)    
Predicted Functional Partners:
GLE_0589
Glycosyl transferase, group 2 family protein.
 
 
  0.880
GLE_0587
Membrane protein.
       0.773
GLE_2461
Glycosyl transferase, group 1 family protein.
  
     0.662
manA
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.610
GLE_2464
Glycosyl transferase, group 1 family protein.
  
     0.604
GLE_2255
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.533
GLE_0591
Membrane protein.
       0.531
pgmB
Beta-phosphoglucomutase.
     
 0.526
GLE_0592
Hypothetical protein.
       0.481
GLE_2455
Undecaprenyl-phosphate glucose phosphotransferase.
 
 
 0.458
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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