Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0614 | GLE_0615 | GLE_0614 | GLE_0615 | TonB family C-terminal domain. | Hypothetical protein. | 0.774 |
GLE_0614 | GLE_0617 | GLE_0614 | GLE_0617 | TonB family C-terminal domain. | TonB-dependent receptor. | 0.796 |
GLE_0614 | GLE_0715 | GLE_0614 | GLE_0715 | TonB family C-terminal domain. | TonB-dependent receptor. | 0.587 |
GLE_0614 | GLE_2417 | GLE_0614 | GLE_2417 | TonB family C-terminal domain. | TonB-dependent siderophore receptor. | 0.623 |
GLE_0614 | GLE_2545 | GLE_0614 | GLE_2545 | TonB family C-terminal domain. | TonB-dependent receptor. | 0.726 |
GLE_0614 | GLE_3678 | GLE_0614 | GLE_3678 | TonB family C-terminal domain. | TonB-dependent siderophore receptor. | 0.632 |
GLE_0614 | GLE_4092 | GLE_0614 | GLE_4092 | TonB family C-terminal domain. | TonB-dependent receptor. | 0.602 |
GLE_0614 | GLE_5404 | GLE_0614 | GLE_5404 | TonB family C-terminal domain. | TonB-dependent siderophore receptor. | 0.616 |
GLE_0614 | exbB | GLE_0614 | GLE_2542 | TonB family C-terminal domain. | TonB-system energizer exbB. | 0.596 |
GLE_0614 | exbD | GLE_0614 | GLE_2541 | TonB family C-terminal domain. | TonB system transport protein exbD. | 0.610 |
GLE_0615 | GLE_0614 | GLE_0615 | GLE_0614 | Hypothetical protein. | TonB family C-terminal domain. | 0.774 |
GLE_0617 | GLE_0614 | GLE_0617 | GLE_0614 | TonB-dependent receptor. | TonB family C-terminal domain. | 0.796 |
GLE_0715 | GLE_0614 | GLE_0715 | GLE_0614 | TonB-dependent receptor. | TonB family C-terminal domain. | 0.587 |
GLE_0715 | GLE_4092 | GLE_0715 | GLE_4092 | TonB-dependent receptor. | TonB-dependent receptor. | 0.560 |
GLE_2417 | GLE_0614 | GLE_2417 | GLE_0614 | TonB-dependent siderophore receptor. | TonB family C-terminal domain. | 0.623 |
GLE_2545 | GLE_0614 | GLE_2545 | GLE_0614 | TonB-dependent receptor. | TonB family C-terminal domain. | 0.726 |
GLE_2545 | exbB | GLE_2545 | GLE_2542 | TonB-dependent receptor. | TonB-system energizer exbB. | 0.486 |
GLE_2545 | exbD | GLE_2545 | GLE_2541 | TonB-dependent receptor. | TonB system transport protein exbD. | 0.483 |
GLE_3678 | GLE_0614 | GLE_3678 | GLE_0614 | TonB-dependent siderophore receptor. | TonB family C-terminal domain. | 0.632 |
GLE_4092 | GLE_0614 | GLE_4092 | GLE_0614 | TonB-dependent receptor. | TonB family C-terminal domain. | 0.602 |
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