STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0618Sigma factor regulatory protein, FecR/PupR family. (336 aa)    
Predicted Functional Partners:
GLE_0619
RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
  0.914
GLE_0617
TonB-dependent receptor.
 
    0.823
GLE_2548
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
  0.814
GLE_5059
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
  0.808
GLE_0600
RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
  0.779
GLE_0731
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
  0.775
fpvA
Ferripyoverdine receptor precursor.
 
 
 0.756
GLE_0872
TonB-dependent siderophore receptor.
 
 
 0.751
GLE_2545
TonB-dependent receptor.
 
     0.731
GLE_2417
TonB-dependent siderophore receptor.
  
    0.674
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.