STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pldBLysophospholipase. (253 aa)    
Predicted Functional Partners:
GLE_0656
Efflux ABC transporter, permease protein.
 
     0.900
GLE_0655
ABC transporter, ATP-binding protein.
 
     0.874
GLE_0086
BNR repeat.
  
 
  0.565
GLE_3671
Hypothetical protein.
   
  0.558
GLE_4029
Glycosyltransferase family 36.
     
 0.524
GLE_4589
Outer membrane autotransporter barrel domain protein.
   
 0.435
GLE_2014
Hypothetical protein.
  
 
  0.425
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.