Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GLE_0693Histidine kinase. (434 aa)    
Predicted Functional Partners:
dctD
C4-dicarboxylate transport transcriptional regulatory protein DctD.
 
 
  0.951
GLE_0632
Sensory box histidine kinase.
   
 0.820
GLE_0164
Sensory box histidine kinase.
   
 0.816
GLE_0701
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.815
GLE_0698
Efflux ABC transporter, permease protein.
 
     0.779
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.768
GLE_1142
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.723
GLE_1143
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.719
GLE_0697
Efflux ABC transporter, permease protein.
 
     0.707
GLE_5368
Sensor histidine kinase.
 
 
0.700
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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