Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0712Hypothetical protein. (1108 aa)    
Predicted Functional Partners:
GLE_0029
Tail length tape measure protein.
  
   0.810
GLE_1431
Hypothetical protein.
    
   0.674
GLE_3751
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.674
GLE_0713
Hypothetical protein.
       0.642
GLE_0714
Hypothetical protein.
       0.590
GLE_3671
Hypothetical protein.
   
   0.484
GLE_0711
Hypothetical protein.
      
0.460
GLE_0155
Hypothetical protein.
    
   0.455
GLE_0494
Ricin type lectin domain protein.
  
   0.433
GLE_4504
Hypothetical protein.
  
   0.433
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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